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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945319.1_cds_XP_016487862.1_78554
CDS Infomation

[gene=LOC107807919] [db_xref=GeneID:107807919] [protein=hypersensitive-induced response protein 1-like] [protein_id=XP_016487862.1] [location=complement(join(16829..17202,17923..18019,18105..18196,18390..18510,19529..19717))] [gbkey=CDS]
Sequence

ATGGGGAATTTGCTTGGCTGTGTACAAGTGGACCAATCCACTGTGGCTATAAAGGAGAGA
TTTGGCAAGTTTAATGATGTGCTTGAGCCTGGATGTCATTTCTTGCCATGGTGTATAGGC
AGCCAGATTGCTGGATACCTTACTTTAAGGTTGCAGCAGCTTGATGTGCGATGCGAGACA
AAGTCAAAGGATAATGTATTTGTAACTGTTGTTGCTTCAATTCAATATCGTGCTCTGGCT
GATAAAGCTACTGATGCTTTTTACAAGCTTAGTAATACTCGATCCCAGATTCAAGCCTAT
GTGTTTGATGTTATCAGAGCTAGTGTTCCAAAGCTAAATCTGGATGATGTCTTTGAGCAG
AAGAATCAAATTGCTAAGGCAGTGGAGGATGAACTTGAAAAGGCAATGTCTGCTTATGGA
TATGAGATTGTTCAGACACTCATAGTTGATATAGAGCCAGATGAACATGTCAAGCGAGCT
ATGAATGAAATCAATGCAGCTGCAAGAATGAGAGTAGCTGCCAATGAGAAAGCAGAAGCT
GAAAAAATTGTCCAGATTAAACGAGCTGAGGGTGATGCTGAGGCTAAGTACCTGGCGGGG
CTTGGGGTTGCTAGACAACGCCAGGCCATTGTGGATGGTTTAAGGGACAGTGTTCTCGGC
TTCTCAAGTAATGTCCCAGGAACGAGTGCCAAGGACGTCTTGGACATGGTCCTCATCACT
CAATATTTTGACACCATGAAGGAAATTGGTGCCACGTCTAAATCCTCAGCAGTCTTTATC
CCACATGGACCTGGAGCTGTTAGTGACATTGCAGGGCAGATTCGACATGGATTGCTCCAA
GGTTCAACTGTCCAGCAACAAAATCTTGTATAA

Peptide Sequence

PEP ID

XP_016487862.1
PEP Infomation

PREDICTED: hypersensitive-induced response protein 1-like [Nicotiana tabacum]
Sequence

MGNLLGCVQVDQSTVAIKERFGKFNDVLEPGCHFLPWCIGSQIAGYLTLRLQQLDVRCET
KSKDNVFVTVVASIQYRALADKATDAFYKLSNTRSQIQAYVFDVIRASVPKLNLDDVFEQ
KNQIAKAVEDELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNEINAAARMRVAANEKAEA
EKIVQIKRAEGDAEAKYLAGLGVARQRQAIVDGLRDSVLGFSSNVPGTSAKDVLDMVLIT
QYFDTMKEIGATSKSSAVFIPHGPGAVSDIAGQIRHGLLQGSTVQQQNLV

Transcript Sequence

Gene sequence data has not been registered.